Tamlana fucoidanivorans strain CW2-9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Allotamlana

Description

Tamlana fucoidanivorans strain CW2-9 is characterized by having a single replicon, indicating a streamlined genome structure that may contribute to its adaptability in specific environments. The strain is cataloged under the accession number VDCS00000000.1, which serves as a reference for genetic and taxonomic studies. The presence of only one replicon suggests a potential for efficient replication and resource allocation, traits that may be advantageous for survival in competitive ecological niches. This streamlined genomic architecture can also facilitate faster evolutionary responses to environmental changes, allowing T. fucoidanivorans to thrive in conditions where other organisms may struggle. In terms of ecological insights, T. fucoidanivorans is likely involved in the degradation of fucoidan, a polysaccharide found in brown seaweeds. This capability positions the strain as a significant player in marine ecosystems, particularly in nutrient cycling and organic matter decomposition. By breaking down fucoidan, T. fucoidanivorans contributes to the recycling of nutrients, thereby supporting the broader marine food web and enhancing ecosystem health. In summary, Tamlana fucoidanivorans strain CW2-9, with its single replicon and specific ecological role, exemplifies the intricate relationships within marine environments, emphasizing the importance of microbial diversity in sustaining ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAllotamlana
SpeciesAllotamlana fucoidanivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tamlana fucoidanivorans strain CW2-9 NODE_152, whole genome

Gene Summary

Adenine Count

1314619 bp

Thymine Count

1327230 bp

Guanine Count

653463 bp

Cytosine Count

727389 bp

Genome Length

4022701 bp

Protein-coding Genes

3345 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii crispr-associated endonuclease cas1FGF67_01210Not AvailablePositive275258 - 27617834622.0
crispr-associated endonuclease cas2FGF67_01215Not AvailablePositive276193 - 27653713488.6
duf4981 domain-containing proteinFGF67_01220Not AvailablePositive277633 - 280725119231.0
alpha/beta hydrolaseFGF67_01225Not AvailableNegative280722 - 28156732255.3
pd-(d/e)xk nuclease family proteinFGF67_01230Not AvailableNegative281569 - 284325106452.0
ompa family proteinFGF67_01235Not AvailableNegative284391 - 28574048064.5
glycine c-acetyltransferaseFGF67_01240Not AvailableNegative285887 - 28708043404.4
dna helicase uvrdFGF67_01245Not AvailableNegative287102 - 290236120082.0
superoxide dismutaseFGF67_01250Not AvailablePositive290359 - 29096722542.2
amidophosphoribosyltransferaseFGF67_01255Not AvailableNegative291450 - 29334871953.5

Displaying genes 241 – 250 of 3392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.