Tamlana fucoidanivorans strain CW2-9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Allotamlana

Description

Tamlana fucoidanivorans strain CW2-9 is characterized by having a single replicon, indicating a streamlined genome structure that may contribute to its adaptability in specific environments. The strain is cataloged under the accession number VDCS00000000.1, which serves as a reference for genetic and taxonomic studies. The presence of only one replicon suggests a potential for efficient replication and resource allocation, traits that may be advantageous for survival in competitive ecological niches. This streamlined genomic architecture can also facilitate faster evolutionary responses to environmental changes, allowing T. fucoidanivorans to thrive in conditions where other organisms may struggle. In terms of ecological insights, T. fucoidanivorans is likely involved in the degradation of fucoidan, a polysaccharide found in brown seaweeds. This capability positions the strain as a significant player in marine ecosystems, particularly in nutrient cycling and organic matter decomposition. By breaking down fucoidan, T. fucoidanivorans contributes to the recycling of nutrients, thereby supporting the broader marine food web and enhancing ecosystem health. In summary, Tamlana fucoidanivorans strain CW2-9, with its single replicon and specific ecological role, exemplifies the intricate relationships within marine environments, emphasizing the importance of microbial diversity in sustaining ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAllotamlana
SpeciesAllotamlana fucoidanivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tamlana fucoidanivorans strain CW2-9 NODE_152, whole genome

Gene Summary

Adenine Count

1314619 bp

Thymine Count

1327230 bp

Guanine Count

653463 bp

Cytosine Count

727389 bp

Genome Length

4022701 bp

Protein-coding Genes

3345 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxymethylglutaryl-coa reductase, degradativeFGF67_08820Not AvailablePositive2193264 - 219459249237.2
ghmp kinaseFGF67_08825Not AvailablePositive2194582 - 219549634457.3
lipid a deacylase lpxr family proteinFGF67_08830Not AvailablePositive2195501 - 219649638269.6
thioredoxin-disulfide reductaseFGF67_08835Not AvailableNegative2196506 - 219687713200.3
Trna-leuNot AvailableNot AvailablePositive2197455 - 2197536Not Available
ribose-phosphate pyrophosphokinaseFGF67_08845Not AvailablePositive2197681 - 219862234367.0
50s ribosomal protein l25/general stress protein ctcFGF67_08850Not AvailablePositive2198662 - 219928222662.9
aminoacyl-trna hydrolaseFGF67_08855Not AvailablePositive2199419 - 219998521240.5
t9ss type a sorting domain-containing proteinFGF67_08860Not AvailableNegative2199995 - 220268897786.5
bifunctional riboflavin kinase/fad synthetaseFGF67_08865Not AvailablePositive2202773 - 220371135341.8

Displaying genes 1751 – 1760 of 3392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.