Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas edaphica |
| Strain | strain RD25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1344006 bp
Thymine Count
1355180 bp
Guanine Count
2019007 bp
Cytosine Count
2016787 bp
Genome Length
6734981 bp
Protein-coding Genes
6438 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | FEM54_26280 | Not Available | Negative | 5462614 - 5463639 | 37877.6 |
| sdr family oxidoreductase | FEM54_26285 | Not Available | Positive | 5463763 - 5464608 | 29990.8 |
| phytanoyl-coa dioxygenase | FEM54_26290 | Not Available | Positive | 5464608 - 5464976 | 13513.0 |
| tripartite tricarboxylate transporter permease | FEM54_26295 | Not Available | Negative | 5464977 - 5465444 | 16022.1 |
| tripartite tricarboxylate transporter tctb family protein | FEM54_26300 | Not Available | Negative | 5465446 - 5465904 | 16814.6 |
| tripartite tricarboxylate transporter substrate binding protein | FEM54_26305 | Not Available | Negative | 5465965 - 5466948 | 35087.3 |
| oprd family porin | FEM54_26310 | Not Available | Negative | 5466982 - 5468271 | 46996.1 |
| response regulator | FEM54_26315 | Not Available | Positive | 5468507 - 5469029 | 19077.3 |
| lysr family transcriptional regulator | FEM54_26320 | Not Available | Negative | 5469030 - 5469938 | 33507.0 |
| nad-dependent epimerase/dehydratase family protein | FEM54_26325 | Not Available | Negative | 5469938 - 5470612 | 24465.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





