Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas edaphica |
| Strain | strain RD25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1344006 bp
Thymine Count
1355180 bp
Guanine Count
2019007 bp
Cytosine Count
2016787 bp
Genome Length
6734981 bp
Protein-coding Genes
6438 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | FEM54_05860 | Not Available | Negative | 1271202 - 1271737 | 19810.4 |
| succinyldiaminopimelate transaminase | FEM54_05865 | Not Available | Positive | 1271738 - 1272749 | 37200.4 |
| hypothetical protein | FEM54_05870 | Not Available | Positive | 1272917 - 1273627 | 26777.4 |
| na+/h+ antiporter | FEM54_05875 | Not Available | Negative | 1273647 - 1275290 | 59888.8 |
| arsc family reductase | FEM54_05880 | Not Available | Positive | 1275515 - 1275877 | 13712.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | FEM54_05885 | Not Available | Positive | 1275909 - 1276943 | 36059.3 |
| cysteine desulfurase | FEM54_05890 | Not Available | Positive | 1277007 - 1278212 | 43278.8 |
| sufe family protein | FEM54_05895 | Not Available | Positive | 1278209 - 1278622 | 15079.1 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | FEM54_05900 | Not Available | Negative | 1278663 - 1279484 | 29399.7 |
| glycosyltransferase | FEM54_05905 | Not Available | Positive | 1279696 - 1282287 | 97414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





