Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas edaphica |
| Strain | strain RD25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1344006 bp
Thymine Count
1355180 bp
Guanine Count
2019007 bp
Cytosine Count
2016787 bp
Genome Length
6734981 bp
Protein-coding Genes
6438 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | FEM54_05710 | Not Available | Negative | 1237585 - 1240314 | 101957.0 |
| pilus assembly protein | FEM54_05715 | Not Available | Negative | 1240311 - 1240751 | 15587.9 |
| prepilin peptidase | FEM54_05720 | Not Available | Positive | 1240824 - 1241297 | 16904.2 |
| response regulator transcription factor | FEM54_05725 | Not Available | Positive | 1241424 - 1242206 | 29087.9 |
| duf3613 domain-containing protein | FEM54_05730 | Not Available | Negative | 1242395 - 1242664 | 9421.21 |
| tetratricopeptide repeat protein | FEM54_05735 | Not Available | Negative | 1242667 - 1243389 | 25489.7 |
| type ii secretion system f family protein | FEM54_05740 | Not Available | Negative | 1243400 - 1244293 | 32742.2 |
| type ii secretion system f family protein | FEM54_05745 | Not Available | Negative | 1244295 - 1245176 | 32988.1 |
| cpaf family protein | FEM54_05750 | Not Available | Negative | 1245196 - 1246458 | 46659.7 |
| pilus assembly protein | FEM54_05755 | Not Available | Negative | 1246455 - 1247648 | 43070.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





