Pseudomonas aeruginosa strain MED16

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas aeruginosa strain MED16 is a gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. As an aerobe, it requires oxygen for growth and is classified as a heterotroph, deriving its energy from organic compounds. This strain thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range. It possesses a single replicon and is characterized by a double membrane structure. Pseudomonas aeruginosa is free-living and can inhabit a variety of environments. It has been associated with numerous hosts, including Homo sapiens, Oncorhynchus mykiss, and various other Metazoa and Viridiplantae. The organism is known for its pathogenicity, affecting animals, humans, and plants alike. In humans, it is linked to a wide range of health complications, including bacteremia, pneumonia, urinary tract infections (UTIs), and several nosocomial infections, which can be severe and opportunistic in nature. The ability of Pseudomonas aeruginosa to form biofilms is particularly notable, as this trait contributes to its resilience and pathogenic potential in various infections, including those in cystic fibrosis patients. Its diverse ecological relationships and adaptability highlight its significance in both natural and clinical settings, where it can act as a formidable pathogen in compromised hosts. Understanding the ecological niches and pathogenic mechanisms of Pseudomonas aeruginosa strain MED16 can inform treatment strategies and preventive measures in healthcare environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas aeruginosa
Strainstrain MED16

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas aeruginosa strain MED16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Oncorhynchus mykiss, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal; Human; Plant

Genome Summary

Pseudomonas aeruginosa strain MED16 contig_00108, whole genome

Gene Summary

Adenine Count

1251501 bp

Thymine Count

1241320 bp

Guanine Count

2355759 bp

Cytosine Count

2406361 bp

Genome Length

7254954 bp

Protein-coding Genes

6692 genes

Non-Coding Genes

280 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcFEM23_34225Not AvailablePositive6969936 - 697109642271.4
porinFEM23_34230Not AvailablePositive6971140 - 69713246732.17
exonuclease sbcdFEM23_34235Not AvailableNegative6971509 - 69716434644.64
exonuclease subunit sbcdFEM23_34240Not AvailablePositive6971596 - 697282545436.4
nuclease sbccd subunit cFEM23_34245Not AvailablePositive6972834 - 6976469138968.0
exodeoxyribonuclease v subunit alphaFEM23_34250Not AvailableNegative6976491 - 697865679101.0
exodeoxyribonuclease v subunit betaFEM23_34255Not AvailableNegative6978653 - 6982390139479.0
exodeoxyribonuclease v subunit gammaFEM23_34260Not AvailableNegative6982387 - 6985902132444.0
lipoate--protein ligase family proteinFEM23_34265Not AvailableNegative6985943 - 698662624848.6
dmt family transporterFEM23_34270Not AvailableNegative6986739 - 698762931646.5

Displaying genes 6721 – 6730 of 6972 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pd-related peritonitisCausesPMC10292988
InfectionsCausesPMC11433527
Nosocomial infectionsCausesPMC11585281
Ventilator-associated pneumoniaCausesPMC11651626
SepsisCausesPMC11651626
Sepsis shockCausesPMC11651626
Catheter-associated urinary tract infectionsCausesPMC11651626
Surgical site infectionsCausesPMC11651626
Burn wound infectionCausesPMC12198309
Bacterial infectionCausesPMC12801787

Displaying health effects 1 – 10 of 34 in total