Pseudomonas aeruginosa strain MED16

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas aeruginosa strain MED16 is a gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. As an aerobe, it requires oxygen for growth and is classified as a heterotroph, deriving its energy from organic compounds. This strain thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range. It possesses a single replicon and is characterized by a double membrane structure. Pseudomonas aeruginosa is free-living and can inhabit a variety of environments. It has been associated with numerous hosts, including Homo sapiens, Oncorhynchus mykiss, and various other Metazoa and Viridiplantae. The organism is known for its pathogenicity, affecting animals, humans, and plants alike. In humans, it is linked to a wide range of health complications, including bacteremia, pneumonia, urinary tract infections (UTIs), and several nosocomial infections, which can be severe and opportunistic in nature. The ability of Pseudomonas aeruginosa to form biofilms is particularly notable, as this trait contributes to its resilience and pathogenic potential in various infections, including those in cystic fibrosis patients. Its diverse ecological relationships and adaptability highlight its significance in both natural and clinical settings, where it can act as a formidable pathogen in compromised hosts. Understanding the ecological niches and pathogenic mechanisms of Pseudomonas aeruginosa strain MED16 can inform treatment strategies and preventive measures in healthcare environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas aeruginosa
Strainstrain MED16

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas aeruginosa strain MED16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Oncorhynchus mykiss, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal; Human; Plant

Genome Summary

Pseudomonas aeruginosa strain MED16 contig_00108, whole genome

Gene Summary

Adenine Count

1251501 bp

Thymine Count

1241320 bp

Guanine Count

2355759 bp

Cytosine Count

2406361 bp

Genome Length

7254954 bp

Protein-coding Genes

6692 genes

Non-Coding Genes

280 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium/glutamate symporterFEM23_28335Not AvailablePositive5701331 - 570254542907.9
ggdef domain-containing proteinFEM23_28340Not AvailablePositive5702775 - 570369534328.2
23s rrna pseudouridine(2605) synthase rlubFEM23_28345Not AvailableNegative5703953 - 570511343675.1
nudix domain-containing proteinFEM23_28350Not AvailablePositive5705261 - 570569816953.9
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseFEM23_28355Not AvailableNegative5705788 - 570645023927.0
6-phosphogluconolactonaseFEM23_28360Not AvailableNegative5706468 - 570718425615.9
glucose-6-phosphate dehydrogenaseFEM23_28365Not AvailableNegative5707171 - 570864055609.5
murr/rpir family transcriptional regulatorFEM23_28370Not AvailablePositive5708827 - 570968431171.6
d-hexose-6-phosphate mutarotaseFEM23_28375Not AvailableNegative5709693 - 571054432322.7
aldose epimeraseFEM23_28380Not AvailablePositive5710533 - 57106644904.96

Displaying genes 5571 – 5580 of 6972 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pd-related peritonitisCausesPMC10292988
InfectionsCausesPMC11433527
Nosocomial infectionsCausesPMC11585281
Ventilator-associated pneumoniaCausesPMC11651626
SepsisCausesPMC11651626
Sepsis shockCausesPMC11651626
Catheter-associated urinary tract infectionsCausesPMC11651626
Surgical site infectionsCausesPMC11651626
Burn wound infectionCausesPMC12198309
Bacterial infectionCausesPMC12801787

Displaying health effects 1 – 10 of 34 in total