Pseudomonas aeruginosa strain MED16

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas aeruginosa strain MED16 is a gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. As an aerobe, it requires oxygen for growth and is classified as a heterotroph, deriving its energy from organic compounds. This strain thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range. It possesses a single replicon and is characterized by a double membrane structure. Pseudomonas aeruginosa is free-living and can inhabit a variety of environments. It has been associated with numerous hosts, including Homo sapiens, Oncorhynchus mykiss, and various other Metazoa and Viridiplantae. The organism is known for its pathogenicity, affecting animals, humans, and plants alike. In humans, it is linked to a wide range of health complications, including bacteremia, pneumonia, urinary tract infections (UTIs), and several nosocomial infections, which can be severe and opportunistic in nature. The ability of Pseudomonas aeruginosa to form biofilms is particularly notable, as this trait contributes to its resilience and pathogenic potential in various infections, including those in cystic fibrosis patients. Its diverse ecological relationships and adaptability highlight its significance in both natural and clinical settings, where it can act as a formidable pathogen in compromised hosts. Understanding the ecological niches and pathogenic mechanisms of Pseudomonas aeruginosa strain MED16 can inform treatment strategies and preventive measures in healthcare environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas aeruginosa
Strainstrain MED16

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas aeruginosa strain MED16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Oncorhynchus mykiss, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal; Human; Plant

Genome Summary

Pseudomonas aeruginosa strain MED16 contig_00108, whole genome

Gene Summary

Adenine Count

1251501 bp

Thymine Count

1241320 bp

Guanine Count

2355759 bp

Cytosine Count

2406361 bp

Genome Length

7254954 bp

Protein-coding Genes

6692 genes

Non-Coding Genes

280 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFEM23_15155Not AvailablePositive3069507 - 30697769837.72
porinFEM23_15160Not AvailableNegative3069938 - 307125447790.0
doxx family proteinFEM23_15165Not AvailableNegative3071501 - 307209121657.7
duf2063 domain-containing proteinFEM23_15170Not AvailableNegative3072094 - 307282828163.6
duf692 domain-containing proteinFEM23_15175Not AvailableNegative3072825 - 307367931656.8
hypothetical proteinFEM23_15180Not AvailableNegative3073698 - 307401210170.9
zf-hc2 domain-containing proteinFEM23_15185Not AvailableNegative3074418 - 30746579184.28
rna polymerase sigma factorFEM23_15190Not AvailableNegative3074651 - 307526222766.1
beta-ketoacyl-acp synthase iiiFEM23_15195Not AvailableNegative3075265 - 307638640617.4
hypothetical proteinFEM23_15200Not AvailablePositive3076877 - 307739218194.8

Displaying genes 3131 – 3140 of 6972 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pd-related peritonitisCausesPMC10292988
InfectionsCausesPMC11433527
Nosocomial infectionsCausesPMC11585281
Ventilator-associated pneumoniaCausesPMC11651626
SepsisCausesPMC11651626
Sepsis shockCausesPMC11651626
Catheter-associated urinary tract infectionsCausesPMC11651626
Surgical site infectionsCausesPMC11651626
Burn wound infectionCausesPMC12198309
Bacterial infectionCausesPMC12801787

Displaying health effects 1 – 10 of 34 in total