Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Verrucomicrobiaceae
Genus
Phragmitibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Verrucomicrobiaceae |
| Genus | Phragmitibacter |
| Species | Phragmitibacter flavus |
| Strain | strain MG-N-17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1277244 bp
Thymine Count
1271554 bp
Guanine Count
1684543 bp
Cytosine Count
1677592 bp
Genome Length
5910933 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | FEM03_16360 | Not Available | Positive | 3998992 - 3999603 | 23025.7 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | FEM03_16365 | Not Available | Positive | 3999976 - 4000746 | 27692.1 |
| duf1328 domain-containing protein | FEM03_16370 | Not Available | Negative | 4001163 - 4001327 | 5714.48 |
| duf892 family protein | FEM03_16375 | Not Available | Negative | 4001448 - 4001978 | 19612.4 |
| response regulator | FEM03_16380 | Not Available | Positive | 4002171 - 4004336 | 81020.9 |
| hybrid sensor histidine kinase/response regulator | FEM03_16385 | Not Available | Positive | 4004336 - 4005439 | 39623.3 |
| sigma-54-dependent fis family transcriptional regulator | FEM03_16390 | Not Available | Positive | 4005507 - 4006868 | 49824.9 |
| hypothetical protein | FEM03_16395 | Not Available | Negative | 4006958 - 4011109 | 153848.0 |
| hypothetical protein | FEM03_16400 | Not Available | Positive | 4011274 - 4012083 | 29356.8 |
| hypothetical protein | FEM03_16405 | Not Available | Positive | 4012134 - 4012982 | 29762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
