Escherichia sp. E2562 c49

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia sp. E2562 c49 is a Gram-negative bacterium characterized by the presence of flagella, which suggests potential motility. This trait is significant as motility can enhance the organism's ability to navigate its environment, possibly influencing its ecological interactions and survival strategies. The bacterium has a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation to its surroundings. The accession number for Escherichia sp. E2562 c49 is VATM00000000.1, which provides a point of reference for researchers seeking genetic and genomic information about this strain. The simplicity of having one replicon may confer advantages in terms of stability and regulation of genetic expression, allowing the organism to respond effectively to environmental changes. In summary, the combination of being Gram-negative, possessing flagella, and having a single replicon presents Escherichia sp. E2562 c49 as a potentially adaptable and motile bacterium. These traits may play a crucial role in its ecological niche, enabling it to thrive in various environments while maintaining genetic stability. Understanding these characteristics can provide insights into the ecological functions and adaptive strategies of this strain within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia sp. E2562
Strainc49

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia sp. E2562 c49
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia sp. E2562 c49, whole genome shotgun sequence.

Gene Summary

Adenine Count

1160247 bp

Thymine Count

1154858 bp

Guanine Count

1184644 bp

Cytosine Count

1184814 bp

Genome Length

4684678 bp

Protein-coding Genes

4180 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent dihydropyrimidine dehydrogenase subunit preaFEK43_11055Not AvailableNegative2324415 - 232565044986.3
nad(p)-dependent oxidoreductaseFEK43_11060Not AvailableNegative2325644 - 232688244428.4
duf2542 family proteinFEK43_11065Not AvailableNegative2327076 - 23273159328.62
outer membrane permeability protein sanaFEK43_11070Not AvailableNegative2327318 - 232803727443.6
cytidine deaminaseFEK43_11075Not AvailableNegative2328223 - 232910731555.6
cidb/lrgb family autolysis modulatorFEK43_11080Not AvailableNegative2329237 - 232993224487.1
hypothetical proteinFEK43_11085Not AvailableNegative2329929 - 233032714579.6
trna dihydrouridine(16) synthase duscFEK43_11090Not AvailablePositive2330600 - 233154735243.6
protein yohpFEK43_11095Not AvailableNegative2331921 - 23320043092.28
multidrug resistance outer membrane protein mdtqFEK43_11100Not AvailablePositive2332227 - 233366652188.9

Displaying genes 2291 – 2300 of 4456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.