Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain N6_del_htrA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
507137 bp
Thymine Count
504267 bp
Guanine Count
318009 bp
Cytosine Count
322735 bp
Genome Length
1652148 bp
Protein-coding Genes
1501 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cag pathogenicity island translocation protein cagz | EGM91_002545 | Not Available | Positive | 522523 - 523122 | 23059.6 |
| cag pathogenicity island type iv secretion system atpase | EGM91_002550 | Not Available | Positive | 523127 - 524119 | 37581.9 |
| cag pathogenicity island type iv secretion system protein cag5 | EGM91_002555 | Not Available | Positive | 524128 - 526374 | 85861.7 |
| cag pathogenicity island peptidoglycan hydrolase cag4 | EGM91_002560 | Not Available | Negative | 526848 - 527357 | 19603.9 |
| type iv secretion system apparatus protein cag3 | EGM91_002565 | Not Available | Negative | 527376 - 528821 | 55018.7 |
| hypothetical protein | EGM91_002570 | Not Available | Negative | 528821 - 529567 | 28722.8 |
| cag pathogenicity island protein cag1 | EGM91_002575 | Not Available | Negative | 529583 - 529930 | 12395.9 |
| sel1 repeat family protein | EGM91_002580 | Not Available | Positive | 530271 - 531125 | 32545.8 |
| type i glutamate--ammonia ligase | EGM91_002585 | Not Available | Negative | 531356 - 532801 | 54453.6 |
| duf262 domain-containing protein | EGM91_002590 | Not Available | Positive | 532938 - 535010 | 81871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |







