Microbispora fusca strain NEAU-HEGS1-5

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Streptosporangiaceae

Genus

Microbispora

Description

Microbispora fusca strain NEAU-HEGS1-5 is characterized by having a single replicon, which is indicative of its genomic organization. This trait can influence the stability and replication efficiency of its genetic material. The strain is documented under the accession number VANP00000000.1, which serves as a reference for genomic studies and facilitates further research into its biological properties. Microbispora fusca, a member of the Actinobacteria phylum, is known for its potential role in various ecological processes, particularly in soil environments where it may contribute to the degradation of complex organic materials. The presence of a single replicon may suggest that this strain has evolved to optimize its genetic functions for specific ecological niches, potentially enhancing its adaptability and survival in diverse habitats. Understanding the genomic structure of Microbispora fusca strain NEAU-HEGS1-5 can provide insights into its metabolic capabilities, ecological interactions, and potential applications in biotechnological fields, such as bioremediation or the production of bioactive compounds. The exploration of its genomic features may uncover further information on its ecological roles and contributions to nutrient cycling in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusMicrobispora
SpeciesMicrobispora triticiradicis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbispora fusca strain NEAU-HEGS1-5 Scaffold54, whole genome

Gene Summary

Adenine Count

1154635 bp

Thymine Count

1154356 bp

Guanine Count

2911383 bp

Cytosine Count

2932474 bp

Genome Length

8152858 bp

Protein-coding Genes

6760 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent aminotransferase family proteinFED44_33625Not AvailableNegative7710538 - 771187546907.6
lyse family translocatorFED44_33630Not AvailablePositive7712000 - 771263521663.4
ribosome small subunit-dependent gtpase aFED44_33635Not AvailableNegative7712632 - 771366036582.9
3-phosphoshikimate 1-carboxyvinyltransferaseFED44_33640Not AvailableNegative7713692 - 771508948168.5
sos response-associated peptidaseFED44_33645Not AvailablePositive7715177 - 771592627992.4
conjugal transfer protein trarFED44_33650Not AvailablePositive7716058 - 771638711652.8
class i sam-dependent methyltransferaseFED44_33655Not AvailableNegative7716462 - 771720227102.5
sigma-70 family rna polymerase sigma factorFED44_33660Not AvailablePositive7717505 - 771814624268.4
mycothiol system anti-sigma-r factorFED44_33665Not AvailablePositive7718143 - 77184099981.91
nad-dependent epimerase/dehydratase family proteinFED44_33670Not AvailablePositive7718512 - 771942932049.8

Displaying genes 6471 – 6480 of 6823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.