Microbispora fusca strain NEAU-HEGS1-5

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Streptosporangiaceae

Genus

Microbispora

Description

Microbispora fusca strain NEAU-HEGS1-5 is characterized by having a single replicon, which is indicative of its genomic organization. This trait can influence the stability and replication efficiency of its genetic material. The strain is documented under the accession number VANP00000000.1, which serves as a reference for genomic studies and facilitates further research into its biological properties. Microbispora fusca, a member of the Actinobacteria phylum, is known for its potential role in various ecological processes, particularly in soil environments where it may contribute to the degradation of complex organic materials. The presence of a single replicon may suggest that this strain has evolved to optimize its genetic functions for specific ecological niches, potentially enhancing its adaptability and survival in diverse habitats. Understanding the genomic structure of Microbispora fusca strain NEAU-HEGS1-5 can provide insights into its metabolic capabilities, ecological interactions, and potential applications in biotechnological fields, such as bioremediation or the production of bioactive compounds. The exploration of its genomic features may uncover further information on its ecological roles and contributions to nutrient cycling in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusMicrobispora
SpeciesMicrobispora triticiradicis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbispora fusca strain NEAU-HEGS1-5 Scaffold54, whole genome

Gene Summary

Adenine Count

1154635 bp

Thymine Count

1154356 bp

Guanine Count

2911383 bp

Cytosine Count

2932474 bp

Genome Length

8152858 bp

Protein-coding Genes

6760 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseFED44_06190Not AvailablePositive1335803 - 133631518123.7
3-dehydroquinate synthaseFED44_06195Not AvailablePositive1336312 - 133738838153.9
type ii 3-dehydroquinate dehydrataseFED44_06200Not AvailablePositive1337385 - 133781915606.4
sgnh/gdsl hydrolase family proteinFED44_06205Not AvailablePositive1337834 - 133863129648.5
atp-dependent dna helicaseFED44_06215Not AvailableNegative1339480 - 134154072948.7
hypothetical proteinFED44_06220Not AvailablePositive1341764 - 134309247959.6
na+/h+ antiporterFED44_06225Not AvailablePositive1343151 - 134474056644.7
ubp-type zinc finger domain-containing proteinFED44_06230Not AvailableNegative1344765 - 13450259654.43
hypothetical proteinFED44_06240Not AvailablePositive1345982 - 134634712406.7
duf202 domain-containing proteinFED44_06245Not AvailablePositive1346437 - 134678712453.6

Displaying genes 1201 – 1210 of 6823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.