Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_21210 | Not Available | Negative | 4727604 - 4727921 | 11778.7 |
| Putative lysozyme family protein | FD718_21215 | Not Available | Negative | 4727994 - 4728521 | 20170.0 |
| Tail protein | FD718_21220 | Not Available | Negative | 4728539 - 4729498 | 35026.2 |
| phage tail protein | FD718_21225 | Not Available | Negative | 4729489 - 4729698 | 7835.09 |
| Putative tail protein | FD718_21230 | Not Available | Negative | 4729673 - 4730074 | 14891.4 |
| Phage-related tail protein | FD718_21235 | Not Available | Negative | 4730074 - 4733031 | 103651.0 |
| Putative phage-related protein | FD718_21240 | Not Available | Negative | 4733158 - 4733688 | 20040.6 |
| Putative tail tube protein | FD718_21245 | Not Available | Negative | 4733761 - 4734228 | 17255.6 |
| Major tail sheath protein | FD718_21250 | Not Available | Negative | 4734240 - 4735385 | 41252.7 |
| hypothetical protein | FD718_21255 | Not Available | Negative | 4735385 - 4735594 | 7988.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


