Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | FD718_03860 | Not Available | Negative | 831635 - 832159 | 20684.2 |
| metalloprotease pmba | FD718_03865 | Not Available | Positive | 832271 - 833614 | 48271.0 |
| magnesium transporter | FD718_03870 | Not Available | Negative | 833710 - 835068 | 49198.4 |
| hpr family phosphocarrier protein | FD718_03875 | Not Available | Negative | 835329 - 835601 | 9644.51 |
| rnase adapter rapz | FD718_03880 | Not Available | Negative | 835598 - 836449 | 32291.8 |
| pts iia-like nitrogen regulatory protein ptsn | FD718_03885 | Not Available | Negative | 836486 - 836935 | 16466.7 |
| ribosome hibernation promoting factor | FD718_03890 | Not Available | Negative | 836938 - 837225 | 10868.0 |
| rna polymerase factor sigma-54 | FD718_03895 | Not Available | Negative | 837262 - 838725 | 54850.8 |
| lps export abc transporter atp-binding protein | FD718_03900 | Not Available | Negative | 838797 - 839522 | 26918.6 |
| lipopolysaccharide transport periplasmic protein lpta | FD718_03905 | Not Available | Negative | 839532 - 840038 | 18768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


