Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2878 domain-containing protein | FD718_02350 | Not Available | Positive | 475014 - 475556 | 20461.0 |
| hypothetical protein | FD718_02355 | Not Available | Positive | 475583 - 476092 | 19846.6 |
| duf3833 domain-containing protein | FD718_02360 | Not Available | Positive | 476096 - 476704 | 23350.8 |
| duf2813 domain-containing protein | FD718_02365 | Not Available | Negative | 476727 - 478427 | 65753.2 |
| lactoylglutathione lyase | FD718_02370 | Not Available | Positive | 478635 - 479030 | 15171.9 |
| bifunctional metallophosphatase/5'-nucleotidase | FD718_02375 | Not Available | Positive | 479399 - 481159 | 64228.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | FD718_02380 | Not Available | Negative | 481303 - 481956 | 23508.2 |
| hypothetical protein | FD718_02385 | Not Available | Positive | 482832 - 483023 | 7252.8 |
| transcriptional regulator | FD718_02390 | Not Available | Positive | 483114 - 483395 | 10507.8 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | FD718_02395 | Not Available | Positive | 483940 - 485496 | 54897.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


