Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | FD718_02300 | Not Available | Negative | 464568 - 465905 | 51521.5 |
| response regulator | FD718_02305 | Not Available | Negative | 465920 - 466627 | 26598.3 |
| duf1722 domain-containing protein | FD718_02310 | Not Available | Positive | 466941 - 467888 | 36254.9 |
| merr family transcriptional regulator | FD718_02315 | Not Available | Positive | 467910 - 468731 | 30860.9 |
| deoxyribodipyrimidine photo-lyase | FD718_02320 | Not Available | Positive | 468740 - 470224 | 57236.1 |
| nuclear transport factor 2 family protein | FD718_02325 | Not Available | Positive | 470309 - 470749 | 16887.2 |
| sdr family nad(p)-dependent oxidoreductase | FD718_02330 | Not Available | Positive | 470746 - 471525 | 28295.4 |
| fad-dependent oxidoreductase | FD718_02335 | Not Available | Positive | 471522 - 472829 | 49912.1 |
| duf1365 domain-containing protein | FD718_02340 | Not Available | Positive | 472829 - 473707 | 34470.6 |
| class i sam-dependent methyltransferase | FD718_02345 | Not Available | Positive | 473814 - 474977 | 44576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


