Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate octaprenyltransferase | FD718_18615 | Not Available | Positive | 4158016 - 4158879 | 32087.3 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | FD718_18620 | Not Available | Negative | 4158972 - 4161422 | 92441.1 |
| repressor lexa | FD718_18625 | Not Available | Positive | 4161791 - 4162417 | 22879.6 |
| class i sam-dependent methyltransferase | FD718_18630 | Not Available | Positive | 4162568 - 4163365 | 30491.9 |
| cytochrome c oxidase subunit ii | FD718_18635 | Not Available | Positive | 4163607 - 4164752 | 43011.3 |
| cytochrome c oxidase subunit i | FD718_18640 | Not Available | Positive | 4164763 - 4166379 | 59832.3 |
| cytochrome c oxidase assembly protein | FD718_18645 | Not Available | Positive | 4166389 - 4166985 | 21601.9 |
| cytochrome c oxidase subunit 3 | FD718_18650 | Not Available | Positive | 4166995 - 4167870 | 32626.5 |
| duf2909 domain-containing protein | FD718_18655 | Not Available | Negative | 4167874 - 4168080 | 7642.97 |
| surf1 family protein | FD718_18660 | Not Available | Positive | 4168147 - 4168869 | 28372.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


