Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extradiol dioxygenase | FD718_16540 | Not Available | Positive | 3670849 - 3671229 | 13539.3 |
| d-hexose-6-phosphate mutarotase | FD718_16545 | Not Available | Negative | 3671318 - 3672193 | 32587.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | FD718_16550 | Not Available | Negative | 3672517 - 3673512 | 35219.9 |
| peptide-methionine (r)-s-oxide reductase msrb | FD718_16555 | Not Available | Positive | 3673850 - 3674245 | 14791.1 |
| duf2989 domain-containing protein | FD718_16560 | Not Available | Negative | 3674320 - 3675171 | 33171.5 |
| duf1315 family protein | FD718_16565 | Not Available | Positive | 3675374 - 3675658 | 10771.9 |
| asparaginase | FD718_16570 | Not Available | Negative | 3675735 - 3676748 | 36916.5 |
| signal peptide peptidase sppa | FD718_16575 | Not Available | Negative | 3677016 - 3678869 | 67402.6 |
| fad-dependent oxidoreductase | FD718_16580 | Not Available | Positive | 3679140 - 3681152 | 73306.3 |
| nad(p)h nitroreductase | FD718_16585 | Not Available | Positive | 3681218 - 3681766 | 19812.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


