Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacylase | FD718_16190 | Not Available | Positive | 3593877 - 3594593 | 26477.3 |
| hypothetical protein | FD718_16195 | Not Available | Positive | 3594778 - 3595032 | 8942.66 |
| extracellular solute-binding protein | FD718_16200 | Not Available | Negative | 3595169 - 3596212 | 39298.6 |
| extracellular solute-binding protein | FD718_16205 | Not Available | Negative | 3596584 - 3597621 | 39041.4 |
| spermidine/putrescine abc transporter permease potc | FD718_16210 | Not Available | Negative | 3597812 - 3598579 | 28068.5 |
| spermidine/putrescine abc transporter permease potb | FD718_16215 | Not Available | Negative | 3598579 - 3599436 | 32341.1 |
| spermidine/putrescine abc transporter atp-binding protein pota | FD718_16220 | Not Available | Negative | 3599420 - 3600538 | 41666.1 |
| hypothetical protein | FD718_16225 | Not Available | Positive | 3600983 - 3601804 | 29656.1 |
| duf2987 domain-containing protein | FD718_16230 | Not Available | Positive | 3601949 - 3602560 | 23177.6 |
| peptidase t | FD718_16235 | Not Available | Positive | 3602735 - 3603967 | 44908.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


