Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | FD718_15990 | Not Available | Positive | 3546047 - 3547381 | 50220.7 |
| dotu family type iv/vi secretion system protein | FD718_15995 | Not Available | Positive | 3547387 - 3548187 | 30480.3 |
| type vi secretion system atpase tssh | FD718_16000 | Not Available | Positive | 3548197 - 3550803 | 96743.7 |
| sigma-54-dependent fis family transcriptional regulator | FD718_16005 | Not Available | Positive | 3550809 - 3552311 | 57011.3 |
| type vi secretion system-associated protein tago | FD718_16010 | Not Available | Positive | 3552317 - 3552979 | 24283.5 |
| type vi secretion system protein tssa | FD718_16015 | Not Available | Positive | 3552989 - 3554437 | 53993.8 |
| type vi secretion system membrane subunit tssm | FD718_16020 | Not Available | Positive | 3554461 - 3558006 | 135262.0 |
| hypothetical protein | FD718_16025 | Not Available | Positive | 3558022 - 3559482 | 54937.7 |
| type vi secretion system paar protein | FD718_16030 | Not Available | Positive | 3559530 - 3559814 | 9331.07 |
| oxidase | FD718_16035 | Not Available | Negative | 3559858 - 3560439 | 21516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


