Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | FD718_15940 | Not Available | Positive | 3535011 - 3535469 | 16718.2 |
| rna chaperone proq | FD718_15945 | Not Available | Positive | 3535580 - 3536212 | 23591.3 |
| carboxy terminal-processing peptidase | FD718_15950 | Not Available | Positive | 3536229 - 3538238 | 75313.4 |
| hypothetical protein | FD718_15955 | Not Available | Positive | 3538427 - 3539089 | 25229.7 |
| nicotinate phosphoribosyltransferase | FD718_15960 | Not Available | Negative | 3539176 - 3540375 | 45365.6 |
| aminopeptidase n | FD718_15965 | Not Available | Positive | 3540676 - 3543300 | 99541.4 |
| duf2835 family protein | FD718_15970 | Not Available | Positive | 3543393 - 3543617 | 8635.47 |
| quinone-dependent dihydroorotate dehydrogenase | FD718_15975 | Not Available | Positive | 3543831 - 3544844 | 36773.6 |
| cell division protein zapc | FD718_15980 | Not Available | Positive | 3545034 - 3545656 | 23810.9 |
| type vi secretion system lipoprotein tssj | FD718_15985 | Not Available | Positive | 3545657 - 3546047 | 15066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


