Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcalcium-binding protein | FD718_15840 | Not Available | Positive | 3499399 - 3509049 | 338563.0 |
| response regulator | FD718_15845 | Not Available | Negative | 3509160 - 3510872 | 64572.7 |
| guanylate cyclase | FD718_15850 | Not Available | Negative | 3510877 - 3511410 | 20026.1 |
| hypothetical protein | FD718_15855 | Not Available | Negative | 3511601 - 3512113 | 19456.9 |
| nitroreductase family protein | FD718_15860 | Not Available | Negative | 3512215 - 3512943 | 27695.4 |
| hth-type transcriptional regulator sgrr | FD718_15865 | Not Available | Positive | 3513204 - 3514892 | 65138.9 |
| d-alanyl-d-alanine carboxypeptidase | FD718_15870 | Not Available | Negative | 3514979 - 3516223 | 46583.9 |
| hypothetical protein | FD718_15875 | Not Available | Negative | 3516291 - 3516749 | 18255.8 |
| phosphotransferase | FD718_15880 | Not Available | Positive | 3517198 - 3518088 | 34560.9 |
| duf4832 domain-containing protein | FD718_15885 | Not Available | Negative | 3518229 - 3519971 | 66474.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


