Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | FD718_15790 | Not Available | Negative | 3483961 - 3484890 | 34547.1 |
| ornithine carbamoyltransferase | FD718_15795 | Not Available | Negative | 3485398 - 3486408 | 37600.1 |
| carbamate kinase | FD718_15800 | Not Available | Negative | 3486533 - 3487444 | 32555.3 |
| arginine deiminase | FD718_15805 | Not Available | Negative | 3487519 - 3488739 | 45162.0 |
| elongation factor tu | FD718_15810 | Not Available | Negative | 3489473 - 3490539 | 38995.5 |
| hypothetical protein | FD718_15815 | Not Available | Negative | 3490540 - 3493592 | 106051.0 |
| electron transport complex subunit rsxc | FD718_15820 | Not Available | Negative | 3494858 - 3496647 | 65582.3 |
| electron transport complex subunit rsxb | FD718_15825 | Not Available | Negative | 3496650 - 3497228 | 20302.7 |
| electron transport complex subunit rsxa | FD718_15830 | Not Available | Negative | 3497230 - 3497811 | 20862.6 |
| dipeptidase pepe | FD718_15835 | Not Available | Positive | 3498192 - 3498929 | 27013.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


