Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1249 family protein | FD718_15740 | Not Available | Positive | 3474250 - 3474681 | 17079.8 |
| 3',5'-cyclic-amp phosphodiesterase | FD718_15745 | Not Available | Positive | 3474717 - 3475544 | 30668.3 |
| esterase yqia | FD718_15750 | Not Available | Positive | 3475544 - 3476122 | 22145.8 |
| dna topoisomerase iv subunit b | FD718_15755 | Not Available | Positive | 3476311 - 3478194 | 69654.5 |
| dna topoisomerase iv subunit a | FD718_15760 | Not Available | Positive | 3478263 - 3480527 | 84536.0 |
| 1-acylglycerol-3-phosphate o-acyltransferase | FD718_15765 | Not Available | Positive | 3480677 - 3481399 | 26676.8 |
| isopentenyl-diphosphate delta-isomerase | FD718_15770 | Not Available | Positive | 3481498 - 3482028 | 20433.1 |
| rida family protein | FD718_15775 | Not Available | Negative | 3482102 - 3482488 | 13748.4 |
| arginine repressor | FD718_15780 | Not Available | Negative | 3482619 - 3483110 | 18093.8 |
| aspartate carbamoyltransferase regulatory subunit | FD718_15785 | Not Available | Negative | 3483477 - 3483941 | 17205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


