Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | FD718_15640 | Not Available | Negative | 3451332 - 3453086 | 66127.2 |
| gatb/yqey domain-containing protein | FD718_15645 | Not Available | Negative | 3453234 - 3453677 | 15962.5 |
| 30s ribosomal protein s21 | FD718_15650 | Not Available | Negative | 3453708 - 3453923 | 8498.56 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | FD718_15655 | Not Available | Positive | 3454176 - 3455195 | 36603.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | FD718_15660 | Not Available | Negative | 3455271 - 3455888 | 22351.1 |
| dihydroneopterin aldolase | FD718_15665 | Not Available | Positive | 3456167 - 3456520 | 13056.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | FD718_15670 | Not Available | Positive | 3456517 - 3457011 | 18915.8 |
| undecaprenyl-diphosphate phosphatase | FD718_15675 | Not Available | Positive | 3457021 - 3457824 | 29180.5 |
| multifunctional cca addition/repair protein | FD718_15680 | Not Available | Negative | 3457870 - 3459102 | 45875.6 |
| duf2075 domain-containing protein | FD718_15685 | Not Available | Positive | 3459299 - 3460942 | 61134.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


