Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | FD718_15540 | Not Available | Negative | 3424432 - 3425127 | 26768.1 |
| rna polymerase-associated protein rapa | FD718_15545 | Not Available | Negative | 3425338 - 3428256 | 110140.0 |
| phoh family protein | FD718_15550 | Not Available | Positive | 3428591 - 3429967 | 51266.4 |
| thiamine abc transporter atp-binding protein | FD718_15555 | Not Available | Negative | 3430056 - 3430760 | 25757.4 |
| thiamine/thiamine pyrophosphate abc transporter, permease protein | FD718_15560 | Not Available | Negative | 3430753 - 3432348 | 58354.7 |
| thiamine abc transporter substrate binding subunit | FD718_15565 | Not Available | Negative | 3432421 - 3433410 | 37022.4 |
| duf547 domain-containing protein | FD718_15570 | Not Available | Negative | 3433662 - 3434462 | 30880.6 |
| 3-isopropylmalate dehydratase small subunit | FD718_15575 | Not Available | Negative | 3434524 - 3435126 | 22617.6 |
| 3-isopropylmalate dehydratase large subunit | FD718_15580 | Not Available | Negative | 3435126 - 3436550 | 50674.8 |
| 3-isopropylmalate dehydrogenase | FD718_15585 | Not Available | Negative | 3436584 - 3437675 | 39467.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


