Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| obg family gtpase cgta | FD718_15490 | Not Available | Positive | 3413690 - 3414865 | 43729.6 |
| threonine/serine exporter family protein | FD718_15495 | Not Available | Positive | 3415027 - 3415815 | 28678.3 |
| hypothetical protein | FD718_15500 | Not Available | Positive | 3415812 - 3416288 | 17260.2 |
| type 3 dihydrofolate reductase | FD718_15505 | Not Available | Positive | 3416314 - 3416796 | 18044.7 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | FD718_15510 | Not Available | Negative | 3416903 - 3417724 | 31119.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | FD718_15515 | Not Available | Negative | 3417850 - 3418662 | 30659.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | FD718_15520 | Not Available | Negative | 3418659 - 3419648 | 35318.8 |
| peptidylprolyl isomerase sura | FD718_15525 | Not Available | Negative | 3419641 - 3420945 | 48364.7 |
| lps assembly protein lptd | FD718_15530 | Not Available | Negative | 3420997 - 3423345 | 88793.7 |
| co-chaperone djla | FD718_15535 | Not Available | Positive | 3423518 - 3424357 | 31314.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


