Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | FD718_15440 | Not Available | Positive | 3404065 - 3404685 | 22586.5 |
| trap transporter fused permease subunit | FD718_15445 | Not Available | Negative | 3404779 - 3407349 | 93182.6 |
| taxi family trap transporter solute-binding subunit | FD718_15450 | Not Available | Negative | 3407459 - 3408430 | 34860.4 |
| transcriptional regulator argr | FD718_15455 | Not Available | Negative | 3408612 - 3409082 | 17100.7 |
| malate dehydrogenase | FD718_15460 | Not Available | Positive | 3409455 - 3410393 | 32263.1 |
| hypothetical protein | FD718_15465 | Not Available | Negative | 3410485 - 3410676 | 7249.51 |
| octaprenyl diphosphate synthase | FD718_15470 | Not Available | Negative | 3410777 - 3411748 | 35156.9 |
| 50s ribosomal protein l21 | FD718_15475 | Not Available | Positive | 3412027 - 3412338 | 11368.7 |
| 50s ribosomal protein l27 | FD718_15480 | Not Available | Positive | 3412357 - 3412614 | 9167.04 |
| dmt family transporter | FD718_15485 | Not Available | Positive | 3412680 - 3413600 | 33658.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


