Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-dependent synthetase | FD718_15385 | Not Available | Positive | 3389735 - 3391384 | 61895.9 |
| tigr03899 family protein | FD718_15395 | Not Available | Negative | 3392603 - 3393427 | 31655.1 |
| ytfj family protein | FD718_15400 | Not Available | Negative | 3393534 - 3394091 | 20288.5 |
| duf1107 domain-containing protein | FD718_15405 | Not Available | Positive | 3394357 - 3394572 | 8285.21 |
| outer membrane protein assembly factor | FD718_15410 | Not Available | Positive | 3394823 - 3396544 | 63779.9 |
| translocation/assembly module tamb | FD718_15415 | Not Available | Positive | 3396541 - 3400293 | 134113.0 |
| rhodanese-like domain-containing protein | FD718_15420 | Not Available | Negative | 3400383 - 3400724 | 12756.3 |
| inorganic diphosphatase | FD718_15425 | Not Available | Negative | 3400763 - 3401293 | 19560.3 |
| class 1 fructose-bisphosphatase | FD718_15430 | Not Available | Negative | 3401440 - 3402450 | 37359.4 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | FD718_15435 | Not Available | Positive | 3402688 - 3404043 | 49118.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


