Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | FD718_15285 | Not Available | Negative | 3365319 - 3366056 | 27051.6 |
| formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | FD718_15290 | Not Available | Negative | 3366131 - 3368554 | 89589.2 |
| glycyl-radical enzyme activating protein | FD718_15295 | Not Available | Negative | 3368557 - 3369498 | 35259.3 |
| fructose-6-phosphate aldolase | FD718_15300 | Not Available | Positive | 3369744 - 3370418 | 24141.3 |
| hypothetical protein | FD718_15305 | Not Available | Negative | 3370736 - 3372181 | 53251.9 |
| ribosome biogenesis gtpase ylqf | FD718_15310 | Not Available | Positive | 3372518 - 3373471 | 36269.9 |
| hypothetical protein | FD718_15315 | Not Available | Negative | 3373543 - 3373968 | 15725.7 |
| dead/deah box helicase | FD718_15320 | Not Available | Positive | 3374302 - 3375594 | 48328.5 |
| beta-ketoacyl synthase | FD718_15325 | Not Available | Negative | 3375734 - 3377590 | 66105.4 |
| helix-turn-helix domain-containing protein | FD718_15330 | Not Available | Positive | 3377749 - 3378732 | 37191.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


