Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | FD718_15230 | Not Available | Positive | 3356514 - 3356984 | 17597.0 |
| duf2787 domain-containing protein | FD718_15235 | Not Available | Positive | 3356981 - 3357406 | 16646.1 |
| duf2787 domain-containing protein | FD718_15240 | Not Available | Positive | 3357469 - 3357918 | 17305.0 |
| wyl domain-containing protein | FD718_15245 | Not Available | Positive | 3358033 - 3358770 | 28624.5 |
| hypothetical protein | FD718_15250 | Not Available | Positive | 3358888 - 3360330 | 53982.0 |
| inovirus gp2 family protein | FD718_15255 | Not Available | Negative | 3360409 - 3361074 | 25753.7 |
| hypothetical protein | FD718_15260 | Not Available | Positive | 3361541 - 3362464 | 36387.5 |
| o-acetyl-adp-ribose deacetylase | FD718_15265 | Not Available | Positive | 3362461 - 3362994 | 19081.0 |
| hypothetical protein | FD718_15275 | Not Available | Positive | 3363369 - 3363623 | 9385.48 |
| voc family protein | FD718_15280 | Not Available | Negative | 3364266 - 3364670 | 15270.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


