Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macro domain-containing protein | FD718_15170 | Not Available | Negative | 3343465 - 3344505 | 38810.0 |
| duf4433 domain-containing protein | FD718_15175 | Not Available | Negative | 3344519 - 3345160 | 24274.1 |
| restriction endonuclease subunit s | FD718_15180 | Not Available | Negative | 3345186 - 3346478 | 47736.9 |
| sam-dependent dna methyltransferase | FD718_15185 | Not Available | Negative | 3346468 - 3348102 | 61643.6 |
| type i restriction endonuclease subunit r | FD718_15190 | Not Available | Negative | 3348129 - 3351278 | 121872.0 |
| helix-turn-helix transcriptional regulator | FD718_15195 | Not Available | Negative | 3351300 - 3351512 | 7975.81 |
| alpa family phage regulatory protein | FD718_15200 | Not Available | Negative | 3351654 - 3351767 | 4170.31 |
| hypothetical protein | FD718_15210 | Not Available | Positive | 3352530 - 3353285 | 28672.6 |
| hypothetical protein | FD718_15215 | Not Available | Positive | 3353470 - 3354915 | 53573.7 |
| alpa family transcriptional regulator | FD718_15225 | Not Available | Negative | 3356156 - 3356335 | 6885.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


