Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_15065 | Not Available | Negative | 3321385 - 3323376 | 74067.4 |
| glutathione s-transferase | FD718_15070 | Not Available | Positive | 3323658 - 3324326 | 25646.8 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | FD718_15075 | Not Available | Negative | 3324458 - 3324859 | 15148.2 |
| duf4102 domain-containing protein | FD718_15080 | Not Available | Positive | 3325522 - 3326721 | 46004.4 |
| hypothetical protein | FD718_15085 | Not Available | Positive | 3327007 - 3327216 | 7619.51 |
| l-ribulose-5-phosphate 3-epimerase | FD718_15090 | Not Available | Negative | 3327363 - 3328244 | 34080.8 |
| 3-dehydro-l-gulonate-6-phosphate decarboxylase | FD718_15095 | Not Available | Negative | 3328254 - 3328901 | 23514.3 |
| cof-type had-iib family hydrolase | FD718_15100 | Not Available | Negative | 3328906 - 3329727 | 31455.3 |
| l-ribulose-5-phosphate 4-epimerase | FD718_15105 | Not Available | Negative | 3329750 - 3330448 | 25599.3 |
| pts ascorbate-specific transporter subunit iia | FD718_15110 | Not Available | Negative | 3330458 - 3330925 | 17022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


