Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_14920 | Not Available | Negative | 3289807 - 3290385 | 22042.8 |
| cyclic nucleotide-binding/cbs domain-containing protein | FD718_14925 | Not Available | Positive | 3290717 - 3292594 | 70822.4 |
| 3'-5' exonuclease | FD718_14930 | Not Available | Positive | 3292591 - 3293340 | 28124.6 |
| bcct family transporter | FD718_14935 | Not Available | Positive | 3293529 - 3295193 | 59543.4 |
| udp-glucose 4-epimerase gale | FD718_14940 | Not Available | Positive | 3295397 - 3296443 | 37664.9 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | FD718_14945 | Not Available | Positive | 3296522 - 3297574 | 40561.8 |
| galactokinase | FD718_14950 | Not Available | Positive | 3297673 - 3298833 | 42266.2 |
| galactose-1-epimerase | FD718_14955 | Not Available | Positive | 3298843 - 3299907 | 39263.2 |
| substrate-binding domain-containing protein | FD718_14960 | Not Available | Negative | 3300540 - 3301538 | 36215.2 |
| duf2975 domain-containing protein | FD718_14965 | Not Available | Positive | 3301845 - 3302393 | 20901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


