Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac | FD718_14760 | Not Available | Positive | 3260206 - 3261663 | 51040.6 |
| pyridoxal phosphate-dependent aminotransferase | FD718_14765 | Not Available | Positive | 3261722 - 3262891 | 44663.1 |
| c69 family dipeptidase | FD718_14770 | Not Available | Negative | 3263028 - 3264500 | 54824.6 |
| duf3316 domain-containing protein | FD718_14775 | Not Available | Negative | 3264890 - 3265240 | 12999.5 |
| hypothetical protein | FD718_14780 | Not Available | Positive | 3265296 - 3265583 | 10942.2 |
| hypothetical protein | FD718_14785 | Not Available | Positive | 3265918 - 3266859 | 35448.5 |
| carbamoyltransferase hypf | FD718_14790 | Not Available | Positive | 3267014 - 3269374 | 88025.3 |
| hypc/hybg/hupf family hydrogenase formation chaperone | FD718_14795 | Not Available | Positive | 3269404 - 3269658 | 9323.46 |
| hydrogenase formation protein hypd | FD718_14800 | Not Available | Positive | 3269658 - 3270782 | 41208.1 |
| hydrogenase expression/formation protein hype | FD718_14805 | Not Available | Positive | 3270793 - 3271785 | 35595.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


