Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retention module-containing protein | FD718_14710 | Not Available | Negative | 3249232 - 3250385 | 41331.8 |
| retention module-containing protein | FD718_14715 | Not Available | Negative | 3251000 - 3251293 | 10293.9 |
| hypothetical protein | FD718_14720 | Not Available | Negative | 3251327 - 3251515 | 6804.3 |
| hlyd family type i secretion periplasmic adaptor subunit | FD718_14725 | Not Available | Positive | 3251805 - 3253199 | 51666.2 |
| tolc family outer membrane protein | FD718_14730 | Not Available | Positive | 3253202 - 3254512 | 49042.6 |
| ompa family protein | FD718_14735 | Not Available | Positive | 3254526 - 3255116 | 21297.0 |
| sulfate adenylyltransferase | FD718_14740 | Not Available | Positive | 3255164 - 3255793 | 24196.1 |
| eal domain-containing protein | FD718_14745 | Not Available | Positive | 3255799 - 3257727 | 72577.8 |
| type i secretion system permease/atpase | FD718_14750 | Not Available | Positive | 3257730 - 3258892 | 43539.4 |
| laci family dna-binding transcriptional regulator | FD718_14755 | Not Available | Negative | 3259036 - 3260028 | 36582.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


