Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | FD718_14605 | Not Available | Positive | 3229577 - 3232027 | 89540.6 |
| tigr03503 family protein | FD718_14610 | Not Available | Negative | 3232056 - 3233291 | 46933.4 |
| dna polymerase iii subunit epsilon | FD718_14615 | Not Available | Negative | 3233293 - 3234018 | 26892.3 |
| ribonuclease hi | FD718_14620 | Not Available | Positive | 3234070 - 3234531 | 17485.5 |
| class i sam-dependent methyltransferase | FD718_14625 | Not Available | Negative | 3234532 - 3235323 | 30159.5 |
| hydroxyacylglutathione hydrolase | FD718_14630 | Not Available | Positive | 3235365 - 3236123 | 27932.0 |
| lysm peptidoglycan-binding domain-containing protein | FD718_14635 | Not Available | Positive | 3236194 - 3237744 | 58325.1 |
| yip1 family protein | FD718_14640 | Not Available | Positive | 3237760 - 3238452 | 25985.0 |
| endonuclease/exonuclease/phosphatase family protein | FD718_14645 | Not Available | Negative | 3238449 - 3239312 | 32160.9 |
| duf1904 domain-containing protein | FD718_14650 | Not Available | Negative | 3239443 - 3239778 | 12599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


