Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-xanthine permease | FD718_14555 | Not Available | Positive | 3216857 - 3218122 | 43927.4 |
| efflux rnd transporter permease subunit | FD718_14560 | Not Available | Negative | 3218225 - 3221335 | 112277.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD718_14565 | Not Available | Negative | 3221352 - 3222548 | 42808.3 |
| marr family transcriptional regulator | FD718_14570 | Not Available | Positive | 3222716 - 3223150 | 16756.5 |
| uracil phosphoribosyltransferase | FD718_14575 | Not Available | Negative | 3223213 - 3223839 | 22742.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | FD718_14580 | Not Available | Positive | 3224036 - 3225076 | 37100.2 |
| phosphoribosylglycinamide formyltransferase | FD718_14585 | Not Available | Positive | 3225080 - 3225727 | 23421.9 |
| class ii glutamine amidotransferase | FD718_14590 | Not Available | Negative | 3225854 - 3226633 | 29291.5 |
| d-sedoheptulose 7-phosphate isomerase | FD718_14595 | Not Available | Negative | 3226690 - 3227268 | 20927.0 |
| c4-dicarboxylic acid transporter daua | FD718_14600 | Not Available | Negative | 3227348 - 3229069 | 60999.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


