Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | FD718_14500 | Not Available | Positive | 3208696 - 3209253 | 20962.8 |
| thioredoxin-dependent thiol peroxidase | FD718_14505 | Not Available | Positive | 3209281 - 3209748 | 17516.0 |
| hypothetical protein | FD718_14510 | Not Available | Positive | 3210158 - 3210493 | 12346.9 |
| ai-2e family transporter | FD718_14520 | Not Available | Negative | 3210925 - 3212004 | 39580.1 |
| sulfurtransferase tusa family protein | FD718_14525 | Not Available | Negative | 3212007 - 3212237 | 8495.38 |
| m48 family metallopeptidase | FD718_14530 | Not Available | Positive | 3212440 - 3213903 | 54772.9 |
| arsenate reductase (glutaredoxin) | FD718_14535 | Not Available | Positive | 3213912 - 3214262 | 13023.7 |
| nad(p)h:quinone oxidoreductase | FD718_14540 | Not Available | Positive | 3214263 - 3214838 | 20723.0 |
| duf2069 domain-containing protein | FD718_14545 | Not Available | Positive | 3214878 - 3215309 | 16601.6 |
| duf2066 domain-containing protein | FD718_14550 | Not Available | Negative | 3215432 - 3216598 | 42604.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


