Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor fabr | FD718_14350 | Not Available | Positive | 3176747 - 3177379 | 23930.7 |
| yijd family membrane protein | FD718_14355 | Not Available | Positive | 3177403 - 3177783 | 14025.5 |
| trna (uridine(54)-c5)-methyltransferase trma | FD718_14360 | Not Available | Negative | 3177852 - 3178958 | 43078.1 |
| tonb-dependent receptor | FD718_14365 | Not Available | Positive | 3179345 - 3181174 | 67770.5 |
| adenine nucleotide alpha hydrolase | FD718_14370 | Not Available | Positive | 3181225 - 3181896 | 25331.4 |
| glutamate racemase | FD718_14375 | Not Available | Positive | 3181954 - 3182775 | 29824.6 |
| rna-binding protein | FD718_14380 | Not Available | Negative | 3182744 - 3183196 | 16466.1 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | FD718_14385 | Not Available | Negative | 3183853 - 3185013 | 43291.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | FD718_14390 | Not Available | Positive | 3185154 - 3185846 | 26462.6 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | FD718_14395 | Not Available | Positive | 3186011 - 3187435 | 53488.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


