Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | FD718_14300 | Not Available | Positive | 3168402 - 3168983 | 22201.7 |
| type ii secretion system protein gspi | FD718_14305 | Not Available | Positive | 3168980 - 3169342 | 13235.0 |
| type ii secretion system protein gspj | FD718_14310 | Not Available | Positive | 3169326 - 3169982 | 24937.7 |
| general secretion pathway protein gspk | FD718_14315 | Not Available | Positive | 3169982 - 3170986 | 37053.0 |
| type ii secretion system protein gspl | FD718_14320 | Not Available | Positive | 3170943 - 3172256 | 49490.1 |
| type ii secretion system protein m | FD718_14325 | Not Available | Positive | 3172253 - 3172732 | 18050.8 |
| type ii secretion system protein n | FD718_14330 | Not Available | Positive | 3172734 - 3173495 | 27239.5 |
| adp compounds hydrolase nude | FD718_14335 | Not Available | Positive | 3173541 - 3174101 | 20796.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | FD718_14340 | Not Available | Positive | 3174101 - 3174925 | 30329.4 |
| si-specific nad(p)(+) transhydrogenase | FD718_14345 | Not Available | Negative | 3175023 - 3176438 | 51889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


