Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | FD718_14250 | Not Available | Positive | 3155587 - 3156504 | 34958.2 |
| asma family protein | FD718_14255 | Not Available | Negative | 3156462 - 3158417 | 74614.0 |
| phosphoenolpyruvate carboxykinase (atp) | FD718_14260 | Not Available | Negative | 3158592 - 3160223 | 60048.9 |
| hsp33 family molecular chaperone hslo | FD718_14265 | Not Available | Negative | 3160548 - 3161426 | 32354.0 |
| ribosome-associated heat shock protein hsp15 | FD718_14270 | Not Available | Negative | 3161564 - 3161971 | 15525.6 |
| type ii secretion system protein gspc | FD718_14275 | Not Available | Positive | 3162263 - 3163159 | 32781.3 |
| type ii secretion system protein gspd | FD718_14280 | Not Available | Positive | 3163199 - 3165205 | 72869.9 |
| type ii secretion system protein gspe | FD718_14285 | Not Available | Positive | 3165205 - 3166710 | 55607.0 |
| type ii secretion system protein gspf | FD718_14290 | Not Available | Positive | 3166711 - 3167931 | 45062.0 |
| type ii secretion system protein gspg | FD718_14295 | Not Available | Positive | 3167955 - 3168395 | 16127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


