Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | FD718_14150 | Not Available | Positive | 3130076 - 3130795 | 26840.0 |
| dna polymerase i | FD718_14155 | Not Available | Positive | 3131931 - 3134702 | 102298.0 |
| yiha family ribosome biogenesis gtp-binding protein | FD718_14160 | Not Available | Negative | 3135644 - 3136309 | 24622.8 |
| cytochrome c4 | FD718_14165 | Not Available | Positive | 3136544 - 3137161 | 21717.0 |
| class i sam-dependent methyltransferase | FD718_14170 | Not Available | Positive | 3138158 - 3138799 | 24186.5 |
| gtpase-activating protein | FD718_14175 | Not Available | Positive | 3138799 - 3139344 | 20684.9 |
| duf2489 domain-containing protein | FD718_14180 | Not Available | Positive | 3139360 - 3139827 | 17941.9 |
| oxygen-independent coproporphyrinogen iii oxidase | FD718_14185 | Not Available | Positive | 3139933 - 3141306 | 53259.9 |
| 3'-5' exonuclease | FD718_14190 | Not Available | Negative | 3141299 - 3142012 | 26633.3 |
| cbs domain-containing protein | FD718_14195 | Not Available | Negative | 3142009 - 3143871 | 70609.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


