Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | FD718_14045 | Not Available | Negative | 3103917 - 3104996 | 40945.7 |
| ig-like domain-containing protein | FD718_14050 | Not Available | Negative | 3105113 - 3106576 | 52269.0 |
| 16s rrna methyltransferase | FD718_14060 | Not Available | Positive | 3109128 - 3109901 | 27929.8 |
| hypothetical protein | FD718_14065 | Not Available | Positive | 3109992 - 3110456 | 16666.6 |
| tetratricopeptide repeat protein | FD718_14070 | Not Available | Negative | 3110801 - 3111988 | 43627.8 |
| uroporphyrinogen-iii c-methyltransferase | FD718_14075 | Not Available | Negative | 3111985 - 3113265 | 46712.4 |
| uroporphyrinogen-iii synthase | FD718_14080 | Not Available | Negative | 3113270 - 3114025 | 27871.5 |
| hydroxymethylbilane synthase | FD718_14085 | Not Available | Negative | 3114025 - 3114957 | 33899.0 |
| class i adenylate cyclase | FD718_14090 | Not Available | Positive | 3115363 - 3117936 | 98956.0 |
| iron donor protein cyay | FD718_14095 | Not Available | Negative | 3118010 - 3118321 | 11909.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


