Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family reductase | FD718_13995 | Not Available | Positive | 3092834 - 3093193 | 13762.5 |
| succinyl-diaminopimelate desuccinylase | FD718_14000 | Not Available | Positive | 3093204 - 3094337 | 40993.7 |
| duf2897 family protein | FD718_14005 | Not Available | Positive | 3094417 - 3094623 | 7946.59 |
| glutamate-5-semialdehyde dehydrogenase | FD718_14010 | Not Available | Negative | 3094672 - 3095970 | 46665.1 |
| glutamate 5-kinase | FD718_14015 | Not Available | Negative | 3096021 - 3097169 | 40844.6 |
| sigma factor-binding protein crl | FD718_14020 | Not Available | Negative | 3097387 - 3097782 | 15440.2 |
| esterase frsa | FD718_14025 | Not Available | Negative | 3097945 - 3099207 | 47111.7 |
| xanthine phosphoribosyltransferase | FD718_14030 | Not Available | Negative | 3099464 - 3099922 | 17169.7 |
| ncs2 family permease | FD718_14035 | Not Available | Negative | 3099999 - 3101288 | 44902.2 |
| aminoacyl-histidine dipeptidase | FD718_14040 | Not Available | Positive | 3102390 - 3103850 | 52700.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


