Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_13945 | Not Available | Positive | 3084693 - 3084914 | 8481.49 |
| tigr02808 family protein | FD718_13950 | Not Available | Negative | 3084962 - 3085099 | 4890.16 |
| cytochrome c | FD718_13955 | Not Available | Negative | 3085114 - 3085689 | 21777.1 |
| nitrate reductase cytochrome c-type subunit | FD718_13960 | Not Available | Negative | 3085704 - 3086219 | 18740.5 |
| periplasmic nitrate reductase subunit alpha | FD718_13965 | Not Available | Negative | 3086291 - 3088777 | 93255.3 |
| nitrate reductase | FD718_13970 | Not Available | Negative | 3088774 - 3089046 | 10218.0 |
| ferredoxin-type protein napf | FD718_13975 | Not Available | Negative | 3089049 - 3089543 | 18322.6 |
| nitrate/nitrite two-component system sensor histidine kinase narq | FD718_13980 | Not Available | Positive | 3089815 - 3091521 | 64455.8 |
| response regulator | FD718_13985 | Not Available | Positive | 3091514 - 3092140 | 22635.3 |
| hypothetical protein | FD718_13990 | Not Available | Negative | 3092222 - 3092500 | 10771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


