Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transporter cysz | FD718_13890 | Not Available | Positive | 3075861 - 3076619 | 28893.8 |
| cysteine synthase a | FD718_13895 | Not Available | Positive | 3076899 - 3077867 | 34320.2 |
| hpr family phosphocarrier protein | FD718_13900 | Not Available | Positive | 3078185 - 3078472 | 10129.2 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | FD718_13905 | Not Available | Positive | 3078528 - 3080255 | 63732.6 |
| pts glucose transporter subunit iia | FD718_13910 | Not Available | Positive | 3080296 - 3080805 | 18096.8 |
| dyp-type peroxidase | FD718_13915 | Not Available | Negative | 3080938 - 3081834 | 33516.8 |
| hypothetical protein | FD718_13925 | Not Available | Negative | 3082446 - 3082847 | 14760.5 |
| duf2919 domain-containing protein | FD718_13930 | Not Available | Negative | 3082853 - 3083314 | 17554.9 |
| duf2956 domain-containing protein | FD718_13935 | Not Available | Positive | 3083789 - 3084124 | 12979.7 |
| duf1499 domain-containing protein | FD718_13940 | Not Available | Positive | 3084137 - 3084583 | 16936.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


