Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook protein flge | FD718_13790 | Not Available | Negative | 3057810 - 3059159 | 48682.1 |
| flagellar hook assembly protein flgd | FD718_13795 | Not Available | Negative | 3059159 - 3059890 | 25976.6 |
| flagellar basal body rod protein flgc | FD718_13800 | Not Available | Negative | 3059914 - 3060333 | 15133.8 |
| flagellar basal body rod protein flgb | FD718_13805 | Not Available | Negative | 3060337 - 3060744 | 14340.9 |
| methyltransferase domain-containing protein | FD718_13810 | Not Available | Negative | 3060872 - 3061696 | 30926.8 |
| chemotaxis protein chev | FD718_13815 | Not Available | Negative | 3061865 - 3062788 | 34064.3 |
| flagellar basal body p-ring formation protein flga | FD718_13820 | Not Available | Positive | 3062881 - 3063576 | 25292.7 |
| flagellar biosynthesis anti-sigma factor flgm | FD718_13825 | Not Available | Positive | 3063701 - 3064021 | 11526.4 |
| flagellar protein flgn | FD718_13830 | Not Available | Positive | 3064051 - 3064476 | 16005.1 |
| flagellar biosynthesis protein flgp | FD718_13835 | Not Available | Negative | 3064510 - 3064950 | 15695.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


