Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellin | FD718_13740 | Not Available | Negative | 3045426 - 3046973 | 53537.7 |
| flagellin | FD718_13745 | Not Available | Negative | 3047440 - 3048900 | 50917.0 |
| flagellar hook-associated protein flgl | FD718_13750 | Not Available | Negative | 3049322 - 3050560 | 44901.1 |
| flagellar hook-associated protein flgk | FD718_13755 | Not Available | Negative | 3050574 - 3052559 | 71056.2 |
| flagellar hook protein | FD718_13760 | Not Available | Positive | 3052812 - 3053000 | 6792.14 |
| flagellar assembly peptidoglycan hydrolase flgj | FD718_13765 | Not Available | Negative | 3053058 - 3054056 | 37008.6 |
| flagellar basal body p-ring protein flgi | FD718_13770 | Not Available | Negative | 3054075 - 3055160 | 37977.7 |
| flagellar basal body l-ring protein | FD718_13775 | Not Available | Negative | 3055208 - 3055987 | 28080.7 |
| flagellar basal-body rod protein flgg | FD718_13780 | Not Available | Negative | 3055999 - 3056787 | 27956.0 |
| flagellar basal-body rod protein flgf | FD718_13785 | Not Available | Negative | 3056804 - 3057553 | 27059.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


